LOC103131055 protein (Poecilia formosa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

LOC103131055

Uncharacterized protein. (346 aa)

Predicted Functional Partners:

ENSPFOP00000018805

0.869

pomgnt1

0.860

ENSPFOP00000005515

0.857

st6gal2

0.857

b3gnt5

0.845

LOC103132032

0.845

ENSPFOP00000001614

0.844

MGAT5B

0.844

B3GNT10

0.842

ENSPFOP00000020838

0.840

Your Current Organism:

Poecilia formosa

NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
B3GNT10	LOC103131055	ENSPFOP00000020551	ENSPFOP00000004473	Hexosyltransferase.	Uncharacterized protein.	0.842
ENSPFOP00000001614	LOC103131055	ENSPFOP00000001614	ENSPFOP00000004473	Uncharacterized protein.	Uncharacterized protein.	0.844
ENSPFOP00000001614	MGAT5B	ENSPFOP00000001614	ENSPFOP00000005267	Uncharacterized protein.	Alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase B.	0.901
ENSPFOP00000001614	pomgnt1	ENSPFOP00000001614	ENSPFOP00000001705	Uncharacterized protein.	Protein O-linked mannose N-acetylglucosaminyltransferase 1 (beta 1,2-).	0.952
ENSPFOP00000005515	LOC103131055	ENSPFOP00000005515	ENSPFOP00000004473	ST6 beta-galactosamide alpha-2,6-sialyltranferase 1; Belongs to the glycosyltransferase 29 family.	Uncharacterized protein.	0.857
ENSPFOP00000005515	st6gal2	ENSPFOP00000005515	ENSPFOP00000015206	ST6 beta-galactosamide alpha-2,6-sialyltranferase 1; Belongs to the glycosyltransferase 29 family.	ST6 beta-galactosamide alpha-2,6-sialyltranferase 2a; Belongs to the glycosyltransferase 29 family.	0.947
ENSPFOP00000018805	LOC103131055	ENSPFOP00000018805	ENSPFOP00000004473	Alpha-(1,6)-fucosyltransferase; Catalyzes the addition of fucose in alpha 1-6 linkage to the first GlcNAc residue, next to the peptide chains in N-glycans. Belongs to the glycosyltransferase 23 family.	Uncharacterized protein.	0.869
ENSPFOP00000020838	LOC103131055	ENSPFOP00000020838	ENSPFOP00000004473	Hexosyltransferase.	Uncharacterized protein.	0.840
ENSPFOP00000020838	LOC103132032	ENSPFOP00000020838	ENSPFOP00000020118	Hexosyltransferase.	Hexosyltransferase.	0.939
ENSPFOP00000020838	b3gnt5	ENSPFOP00000020838	ENSPFOP00000004486	Hexosyltransferase.	Hexosyltransferase.	0.952
LOC103131055	B3GNT10	ENSPFOP00000004473	ENSPFOP00000020551	Uncharacterized protein.	Hexosyltransferase.	0.842
LOC103131055	ENSPFOP00000001614	ENSPFOP00000004473	ENSPFOP00000001614	Uncharacterized protein.	Uncharacterized protein.	0.844
LOC103131055	ENSPFOP00000005515	ENSPFOP00000004473	ENSPFOP00000005515	Uncharacterized protein.	ST6 beta-galactosamide alpha-2,6-sialyltranferase 1; Belongs to the glycosyltransferase 29 family.	0.857
LOC103131055	ENSPFOP00000018805	ENSPFOP00000004473	ENSPFOP00000018805	Uncharacterized protein.	Alpha-(1,6)-fucosyltransferase; Catalyzes the addition of fucose in alpha 1-6 linkage to the first GlcNAc residue, next to the peptide chains in N-glycans. Belongs to the glycosyltransferase 23 family.	0.869
LOC103131055	ENSPFOP00000020838	ENSPFOP00000004473	ENSPFOP00000020838	Uncharacterized protein.	Hexosyltransferase.	0.840
LOC103131055	LOC103132032	ENSPFOP00000004473	ENSPFOP00000020118	Uncharacterized protein.	Hexosyltransferase.	0.845
LOC103131055	MGAT5B	ENSPFOP00000004473	ENSPFOP00000005267	Uncharacterized protein.	Alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase B.	0.844
LOC103131055	b3gnt5	ENSPFOP00000004473	ENSPFOP00000004486	Uncharacterized protein.	Hexosyltransferase.	0.845
LOC103131055	pomgnt1	ENSPFOP00000004473	ENSPFOP00000001705	Uncharacterized protein.	Protein O-linked mannose N-acetylglucosaminyltransferase 1 (beta 1,2-).	0.860
LOC103131055	st6gal2	ENSPFOP00000004473	ENSPFOP00000015206	Uncharacterized protein.	ST6 beta-galactosamide alpha-2,6-sialyltranferase 2a; Belongs to the glycosyltransferase 29 family.	0.857