STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103146025Homeobox domain-containing protein. (442 aa)    
Predicted Functional Partners:
ENSPFOP00000016088
Iroquois homeobox 6a.
   
 
 0.834
ENSPFOP00000016648
Iroquois homeobox 4a.
   
 
 0.834
ENSPFOP00000006944
Mohawk homeobox a.
    
 
 0.753
ENSPFOP00000013485
Mohawk homeobox b.
    
 
 0.753
dlx1
Distal-less homeobox 1a.
   
 
 0.744
dlx2
Distal-less homeobox 2b.
    
 
 0.733
LOC103151577
Uncharacterized protein.
    
 0.664
ENSPFOP00000027657
Teashirt zinc finger homeobox 1.
    
 0.664
hhex
Homeobox domain-containing protein.
    
 
 0.601
irx3
Iroquois homeobox 3a.
   
  
 0.563
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.