PITPNM2 protein (Poecilia formosa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Poecilia formosa

NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPFOP00000002802	ENSPFOP00000013247	ENSPFOP00000002802	ENSPFOP00000013247	VAMP (vesicle-associated membrane protein)-associated protein A, like.	Si:ch211-1i11.3.	0.491
ENSPFOP00000002802	ENSPFOP00000015853	ENSPFOP00000002802	ENSPFOP00000015853	VAMP (vesicle-associated membrane protein)-associated protein A, like.	Mitogen-activated protein kinase kinase kinase 5.	0.491
ENSPFOP00000002802	PITPNM2	ENSPFOP00000002802	ENSPFOP00000004579	VAMP (vesicle-associated membrane protein)-associated protein A, like.	Phosphatidylinositol transfer protein membrane associated 2.	0.605
ENSPFOP00000002802	zfpl1	ENSPFOP00000002802	ENSPFOP00000019035	VAMP (vesicle-associated membrane protein)-associated protein A, like.	Zinc finger protein-like 1.	0.802
ENSPFOP00000013247	ENSPFOP00000002802	ENSPFOP00000013247	ENSPFOP00000002802	Si:ch211-1i11.3.	VAMP (vesicle-associated membrane protein)-associated protein A, like.	0.491
ENSPFOP00000013247	ENSPFOP00000015853	ENSPFOP00000013247	ENSPFOP00000015853	Si:ch211-1i11.3.	Mitogen-activated protein kinase kinase kinase 5.	0.902
ENSPFOP00000013247	LOC103134561	ENSPFOP00000013247	ENSPFOP00000013115	Si:ch211-1i11.3.	VAMP (vesicle-associated membrane protein)-associated protein B and C.	0.491
ENSPFOP00000013247	LOC103156041	ENSPFOP00000013247	ENSPFOP00000006677	Si:ch211-1i11.3.	MSP domain-containing protein.	0.491
ENSPFOP00000013247	PITPNM2	ENSPFOP00000013247	ENSPFOP00000004579	Si:ch211-1i11.3.	Phosphatidylinositol transfer protein membrane associated 2.	0.741
ENSPFOP00000015853	ENSPFOP00000002802	ENSPFOP00000015853	ENSPFOP00000002802	Mitogen-activated protein kinase kinase kinase 5.	VAMP (vesicle-associated membrane protein)-associated protein A, like.	0.491
ENSPFOP00000015853	ENSPFOP00000013247	ENSPFOP00000015853	ENSPFOP00000013247	Mitogen-activated protein kinase kinase kinase 5.	Si:ch211-1i11.3.	0.902
ENSPFOP00000015853	LOC103134561	ENSPFOP00000015853	ENSPFOP00000013115	Mitogen-activated protein kinase kinase kinase 5.	VAMP (vesicle-associated membrane protein)-associated protein B and C.	0.493
ENSPFOP00000015853	LOC103156041	ENSPFOP00000015853	ENSPFOP00000006677	Mitogen-activated protein kinase kinase kinase 5.	MSP domain-containing protein.	0.491
ENSPFOP00000015853	PITPNM2	ENSPFOP00000015853	ENSPFOP00000004579	Mitogen-activated protein kinase kinase kinase 5.	Phosphatidylinositol transfer protein membrane associated 2.	0.741
LOC103129518	PITPNM2	ENSPFOP00000000097	ENSPFOP00000004579	Uncharacterized protein.	Phosphatidylinositol transfer protein membrane associated 2.	0.500
LOC103132032	PITPNM2	ENSPFOP00000020118	ENSPFOP00000004579	Hexosyltransferase.	Phosphatidylinositol transfer protein membrane associated 2.	0.547
LOC103134561	ENSPFOP00000013247	ENSPFOP00000013115	ENSPFOP00000013247	VAMP (vesicle-associated membrane protein)-associated protein B and C.	Si:ch211-1i11.3.	0.491
LOC103134561	ENSPFOP00000015853	ENSPFOP00000013115	ENSPFOP00000015853	VAMP (vesicle-associated membrane protein)-associated protein B and C.	Mitogen-activated protein kinase kinase kinase 5.	0.493
LOC103134561	PITPNM2	ENSPFOP00000013115	ENSPFOP00000004579	VAMP (vesicle-associated membrane protein)-associated protein B and C.	Phosphatidylinositol transfer protein membrane associated 2.	0.605
LOC103134561	zfpl1	ENSPFOP00000013115	ENSPFOP00000019035	VAMP (vesicle-associated membrane protein)-associated protein B and C.	Zinc finger protein-like 1.	0.802