Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPFOP00000004635Si:ch211-168d23.3. (1120 aa)    
Predicted Functional Partners:
bcl7a
BAF chromatin remodeling complex subunit BCL7A.
    
 0.950
brd9
Bromodomain containing 9.
    
 0.927
brd7
Bromodomain containing 7.
    
 0.927
ENSPFOP00000015063
Actin-like 6A; Belongs to the actin family.
    
 0.895
smarca2
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2.
    
 0.892
smarca4
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4a.
    
 0.892
LOC103137716
Uncharacterized protein.
    
 0.892
ss18
SS18 subunit of BAF chromatin remodeling complex.
    
 0.882
SS18L1
SS18L1 subunit of BAF chromatin remodeling complex.
    
 0.882
ENSPFOP00000012523
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3b.
    
 0.852
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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