STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPFOP00000004642Opsin 7, group member c; Belongs to the G-protein coupled receptor 1 family. Opsin subfamily. (224 aa)    
Predicted Functional Partners:
ENSPFOP00000028219
Uncharacterized protein.
    
  0.626
ENSPFOP00000007358
HAUS augmin-like complex, subunit 3.
    
 0.465
haus1
HAUS augmin-like complex, subunit 1.
    
 0.446
pnoc
Prepronociceptin a.
    
  0.444
ENSPFOP00000018651
Uncharacterized protein.
    
  0.441
LOC103146452
Guanine nucleotide binding protein (G protein), beta polypeptide 3b.
    
 0.428
edn1
Endothelin 1.
    
  0.416
gnb3
Guanine nucleotide binding protein (G protein), beta polypeptide 3a.
    
 0.410
gnb1
Guanine nucleotide binding protein (G protein), beta polypeptide 1a.
    
 0.405
LOC103137054
Guanine nucleotide binding protein (G protein), beta polypeptide 1b.
    
 0.405
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.