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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPFOP00000004674Low density lipoprotein receptor-related protein 1Ab. (4550 aa)    
Predicted Functional Partners:
lrpap1
Low density lipoprotein receptor-related protein associated protein 1.
    
 0.845
ENSPFOP00000015559
Dickkopf WNT signaling pathway inhibitor 1a.
    
 0.820
LOC103141587
Apolipoprotein Eb.
    
 0.816
RELN
Reelin.
    
 0.767
ldlrap1
Low density lipoprotein receptor adaptor protein 1b.
    
 0.719
pcsk9
Uncharacterized protein.
    
 0.718
dab2
DAB adaptor protein 2.
    
 0.694
ENSPFOP00000014457
Kringle containing transmembrane protein 1.
    
 0.692
ENSPFOP00000000448
NtA domain-containing protein.
    
 0.672
ENSPFOP00000000964
NtA domain-containing protein.
    
 0.672
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.