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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103134017Rho GTPase activating protein 22. (727 aa)    
Predicted Functional Partners:
mst1r
Macrophage stimulating 1 receptor b.
    
  0.665
LOC103150629
MET proto-oncogene, receptor tyrosine kinase.
    
  0.665
LOC103137246
Macrophage stimulating 1 receptor a.
    
  0.665
met
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
  0.665
LOC103144092
Cell division cycle 42.
    
 0.654
CDC42
Cell division cycle 42.
    
 0.654
rasa1
RAS p21 protein activator (GTPase activating protein) 1a.
    
 0.623
LOC103151580
Uncharacterized protein.
    
 0.622
ENSPFOP00000010134
Synaptic Ras GTPase activating protein 1b.
    
 0.622
ENSPFOP00000011531
Uncharacterized protein.
    
 0.622
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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