ENSPFOP00000004872 protein (Poecilia formosa)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Poecilia formosa

NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPFOP00000004872	ENSPFOP00000010558	ENSPFOP00000004872	ENSPFOP00000010558	Uncharacterized protein.	Si:ch211-263k4.2.	0.699
ENSPFOP00000004872	ENSPFOP00000011552	ENSPFOP00000004872	ENSPFOP00000011552	Uncharacterized protein.	REST corepressor 3.	0.623
ENSPFOP00000004872	ENSPFOP00000020798	ENSPFOP00000004872	ENSPFOP00000020798	Uncharacterized protein.	Si:ch211-263k4.2.	0.699
ENSPFOP00000004872	ENSPFOP00000022916	ENSPFOP00000004872	ENSPFOP00000022916	Uncharacterized protein.	Uncharacterized protein.	0.888
ENSPFOP00000004872	LOC103133568	ENSPFOP00000004872	ENSPFOP00000017913	Uncharacterized protein.	C-terminal binding protein 2; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.	0.621
ENSPFOP00000004872	LOC103135552	ENSPFOP00000004872	ENSPFOP00000008594	Uncharacterized protein.	C-terminal binding protein 1; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.	0.621
ENSPFOP00000004872	ctbp1	ENSPFOP00000004872	ENSPFOP00000003547	Uncharacterized protein.	C-terminal binding protein 1; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.	0.621
ENSPFOP00000004872	kdm1a	ENSPFOP00000004872	ENSPFOP00000010348	Uncharacterized protein.	Lysine-specific histone demethylase; Histone demethylase that demethylates both 'Lys-4' (H3K4me) and 'Lys-9' (H3K9me) of histone H3, thereby acting as a coactivator or a corepressor, depending on the context. Acts by oxidizing the substrate by FAD to generate the corresponding imine that is subsequently hydrolyzed. Acts as a corepressor by mediating demethylation of H3K4me, a specific tag for epigenetic transcriptional activation. Demethylates both mono- (H3K4me1) and di-methylated (H3K4me2) H3K4me; Belongs to the flavin monoamine oxidase family.	0.838
ENSPFOP00000004872	rcor1	ENSPFOP00000004872	ENSPFOP00000009631	Uncharacterized protein.	REST corepressor 1.	0.623
ENSPFOP00000004872	rcor2	ENSPFOP00000004872	ENSPFOP00000001421	Uncharacterized protein.	REST corepressor 2.	0.623
ENSPFOP00000010558	ENSPFOP00000004872	ENSPFOP00000010558	ENSPFOP00000004872	Si:ch211-263k4.2.	Uncharacterized protein.	0.699
ENSPFOP00000010558	ENSPFOP00000020798	ENSPFOP00000010558	ENSPFOP00000020798	Si:ch211-263k4.2.	Si:ch211-263k4.2.	0.845
ENSPFOP00000010558	ENSPFOP00000022916	ENSPFOP00000010558	ENSPFOP00000022916	Si:ch211-263k4.2.	Uncharacterized protein.	0.699
ENSPFOP00000010558	LOC103133568	ENSPFOP00000010558	ENSPFOP00000017913	Si:ch211-263k4.2.	C-terminal binding protein 2; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.	0.543
ENSPFOP00000010558	LOC103135552	ENSPFOP00000010558	ENSPFOP00000008594	Si:ch211-263k4.2.	C-terminal binding protein 1; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.	0.543
ENSPFOP00000010558	ctbp1	ENSPFOP00000010558	ENSPFOP00000003547	Si:ch211-263k4.2.	C-terminal binding protein 1; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.	0.543
ENSPFOP00000011552	ENSPFOP00000004872	ENSPFOP00000011552	ENSPFOP00000004872	REST corepressor 3.	Uncharacterized protein.	0.623
ENSPFOP00000011552	ENSPFOP00000022916	ENSPFOP00000011552	ENSPFOP00000022916	REST corepressor 3.	Uncharacterized protein.	0.623
ENSPFOP00000011552	LOC103133568	ENSPFOP00000011552	ENSPFOP00000017913	REST corepressor 3.	C-terminal binding protein 2; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.	0.609
ENSPFOP00000011552	LOC103135552	ENSPFOP00000011552	ENSPFOP00000008594	REST corepressor 3.	C-terminal binding protein 1; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.	0.609