STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103132063GRIP1 associated protein 1. (527 aa)    
Predicted Functional Partners:
ccz1
CCZ1 homolog, vacuolar protein trafficking and biogenesis associated.
    
 0.951
ENSPFOP00000025548
Uncharacterized protein.
 
     0.929
pcnp
PEST proteolytic signal containing nuclear protein.
    
   0.874
ENSPFOP00000005771
VPS39 subunit of HOPS complex.
   
 
 0.855
rmc1
Regulator of MON1-CCZ1.
    
 
 0.849
vps41
Vacuolar protein sorting-associated protein 41 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport pathways; Belongs to the VPS41 family.
    
 
 0.841
armc5
Armadillo repeat containing 5.
    
 0.791
LOC103135635
RAB9B, member RAS oncogene family.
    
 0.791
ENSPFOP00000020269
Uncharacterized protein.
    
 0.791
RAB9A
RAB9A, member RAS oncogene family.
    
 0.791
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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