Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
klf11Kruppel-like factor 11b. (515 aa)    
Predicted Functional Partners:
pcna
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
    
 0.717
sp1
Sp1 transcription factor.
    
  0.638
LOC103149692
SIN3 transcription regulator family member Ab.
    
 
 0.594
sin3b
SIN3 transcription regulator family member B.
    
 
 0.594
sin3a
SIN3 transcription regulator family member Aa.
    
 
 0.594
NAB2
NGFI-A binding protein 2 (EGR1 binding protein 2).
    
 0.547
ENSPFOP00000016278
NGFI-A binding protein 2 (EGR1 binding protein 2).
    
 0.547
LOC103155772
NME/NM23 family member 8; Belongs to the NDK family.
    
 0.527
mysm1
Myb-like, SWIRM and MPN domains 1.
    
  0.522
tbrg1
Transforming growth factor beta regulator 1.
    
 0.451
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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