Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPFOP00000005035Proline rich 16. (333 aa)    
Predicted Functional Partners:
ENSPFOP00000003740
Vacuolar protein sorting 13 homolog D.
      
 0.721
morn5
MORN repeat containing 5.
      
 0.703
dph5
Diphthamide biosynthesis 5.
      
 0.693
phox2a
Paired like homeobox 2A.
      
 0.660
cachd1
Cache domain containing 1.
      
 0.652
ENSPFOP00000000489
Synuclein, alpha interacting protein.
      
 0.641
ENSPFOP00000027479
Dedicator of cytokinesis 10; Belongs to the DOCK family.
      
 0.640
LOC103151993
Uncharacterized protein.
      
 0.583
LOC103131344
Cordon-bleu WH2 repeat protein.
      
 0.499
mtmr10
Myotubularin related protein 10.
      
 0.461
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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