STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dlx5Distal-less homeobox 5a. (286 aa)    
Predicted Functional Partners:
ENSPFOP00000003452
Homeobox domain-containing protein.
   
0.647
bmp4
Bone morphogenetic protein 4.
     
 0.606
LOC103153586
Runt-related transcription factor.
   
 
 0.586
LOC103130586
Runt-related transcription factor.
   
 
 0.586
ENSPFOP00000016177
Runt-related transcription factor.
   
 
 0.586
bmp2
Bone morphogenetic protein 2b.
     
 0.570
LOC103136288
Bone morphogenetic protein 16.
     
 0.570
ENSPFOP00000013771
Runt domain-containing protein.
   
 
 0.547
myf6
Myogenic factor 6.
   
  
 0.510
ENSPFOP00000011033
Lymphoid enhancer-binding factor 1.
    
 0.461
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.