Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC103140921Si:ch211-114m9.1. (934 aa)    
Predicted Functional Partners:
LOC103129178
SH3-domain binding protein 1.
    
   0.790
ENSPFOP00000004438
Angiomotin.
    
 
 0.664
LOC103136358
Uncharacterized protein.
    
 0.643
LOC103143729
Thyroid hormone receptor interactor 10a.
    
 0.643
MPP5
Membrane palmitoylated protein 5; Belongs to the MAGUK family.
    
 
 0.634
mpp5
Membrane protein, palmitoylated 5b (MAGUK p55 subfamily member 5); Belongs to the MAGUK family.
    
 
 0.634
LOC103144092
Cell division cycle 42.
   
 0.620
CDC42
Cell division cycle 42.
   
 0.620
rac2
Rac family small GTPase 2.
   
  0.603
RAC1
Rac family small GTPase 1.
   
  0.603
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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