Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103144443Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family. (298 aa)    
Predicted Functional Partners:
mrps18c
Mitochondrial ribosomal protein S18C.
      
 0.680
pot1
Telo_bind domain-containing protein.
    
 0.601
LOC103132368
Zgc:77739.
      
 0.546
LOC103132379
Zgc:77739.
      
 0.546
ENSPFOP00000009368
Zinc finger, FYVE domain containing 19.
      
 0.521
LOC103146132
Myelin protein zero-like 1 like.
      
 0.498
LOC103156947
Uncharacterized protein.
    
 0.486
LOC103152264
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
     
 0.482
LOC103147700
Golgin A7 family member B.
    
 0.482
zdhhc1
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
     
 0.482
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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