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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tnfaip1BTB domain-containing protein. (324 aa)    
Predicted Functional Partners:
ENSPFOP00000009388
UBX domain protein 7.
    
 
 0.941
ubxn1
UBX domain protein 1.
    
 
 0.814
faf1
Fas (TNFRSF6) associated factor 1.
    
 
 0.747
CUL3
Cullin 3; Belongs to the cullin family.
    
 0.677
ENSPFOP00000010423
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.677
rnd2
Rho family GTPase 2.
    
 0.642
ENSPFOP00000008904
Rho family GTPase 2.
    
 0.642
LOC103141407
Rho family GTPase 3a.
    
 0.616
RND1
Rho family GTPase 1.
    
 0.616
LOC103141170
Rho family GTPase 1b.
    
 0.616
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.