Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103152031Si:ch211-241f5.3; Belongs to the G-protein coupled receptor 2 family. (542 aa)    
Predicted Functional Partners:
cd55
Uncharacterized protein.
   
 0.871
ENSPFOP00000022961
Uncharacterized protein.
   
 0.871
NDUFA13
NADH:ubiquinone oxidoreductase subunit A13.
      
 0.542
acot13
Acyl-CoA thioesterase 13.
      
 0.498
ttf1
Uncharacterized protein.
      
 0.494
pla2g7
Platelet-activating factor acetylhydrolase.
      
 0.431
dab2
DAB adaptor protein 2.
   
  
 0.429
ENSPFOP00000007414
Adhesion G protein-coupled receptor V1; Belongs to the G-protein coupled receptor 2 family.
      
 0.423
ENSPFOP00000009702
Fermitin family member 3b.
   
  
 0.423
ENSPFOP00000005552
alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.
      
 0.409
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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