STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ccdc102aCoiled-coil domain containing 102A. (575 aa)    
Predicted Functional Partners:
LOC103138270
Uncharacterized protein.
      
 0.588
ktn1
Kinectin 1.
      
 0.556
cdc42ep4
CDC42 effector protein (Rho GTPase binding) 4b.
      
 0.533
EPS15L1
Epidermal growth factor receptor pathway substrate 15 like 1.
      
 0.509
ENSPFOP00000030395
Uncharacterized protein.
      
 0.509
sugct
Succinyl-CoA:glutarate-CoA transferase.
      
 0.483
metrn
Meteorin, glial cell differentiation regulator.
      
 0.479
nup107
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
      
 0.459
ENSPFOP00000009898
Uncharacterized protein.
    
 
 0.429
LOC103130378
Ankyrin repeat and SOCS box containing 2a, tandem duplicate 1.
    
 
 0.429
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.