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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slc33a1Solute carrier family 33 member 1. (550 aa)    
Predicted Functional Partners:
LOC103147665
Beta-1,4 N-acetylgalactosaminyltransferase.
     
 0.902
ENSPFOP00000001006
Beta-1,4 N-acetylgalactosaminyltransferase.
     
 0.899
ENSPFOP00000008611
Beta-1,4 N-acetylgalactosaminyltransferase.
     
 0.899
ENSPFOP00000010429
Glyco_trans_2-like domain-containing protein.
     
 0.898
ENSPFOP00000005273
Malate synthase-like.
  
 0.800
LOC103156682
DnaJ heat shock protein family (Hsp40) member B9b.
  
 
 0.744
LOC103134423
DnaJ heat shock protein family (Hsp40) member B9a.
  
   0.726
LOC103131426
Cytochrome b5 reductase 4.
    
  0.676
LOC103147628
J domain-containing protein.
  
   0.671
LOC103146444
Glyceraldehyde-3-phosphate dehydrogenase.
   
 0.619
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.