Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ENSPFOP00000009029 | LOC103139283 | ENSPFOP00000009029 | ENSPFOP00000005999 | Trinucleotide repeat containing adaptor 6A. | Argonaute RISC component 1; Belongs to the argonaute family. | 0.864 |
ENSPFOP00000009029 | dicer1 | ENSPFOP00000009029 | ENSPFOP00000008767 | Trinucleotide repeat containing adaptor 6A. | Dicer 1, ribonuclease type III; Belongs to the helicase family. Dicer subfamily. | 0.466 |
ENSPFOP00000009029 | drosha | ENSPFOP00000009029 | ENSPFOP00000000631 | Trinucleotide repeat containing adaptor 6A. | Uncharacterized protein. | 0.429 |
ENSPFOP00000011791 | LOC103139283 | ENSPFOP00000011791 | ENSPFOP00000005999 | Trinucleotide repeat containing adaptor 6C2. | Argonaute RISC component 1; Belongs to the argonaute family. | 0.864 |
ENSPFOP00000011791 | dicer1 | ENSPFOP00000011791 | ENSPFOP00000008767 | Trinucleotide repeat containing adaptor 6C2. | Dicer 1, ribonuclease type III; Belongs to the helicase family. Dicer subfamily. | 0.466 |
ENSPFOP00000011791 | drosha | ENSPFOP00000011791 | ENSPFOP00000000631 | Trinucleotide repeat containing adaptor 6C2. | Uncharacterized protein. | 0.429 |
LOC103139283 | ENSPFOP00000009029 | ENSPFOP00000005999 | ENSPFOP00000009029 | Argonaute RISC component 1; Belongs to the argonaute family. | Trinucleotide repeat containing adaptor 6A. | 0.864 |
LOC103139283 | ENSPFOP00000011791 | ENSPFOP00000005999 | ENSPFOP00000011791 | Argonaute RISC component 1; Belongs to the argonaute family. | Trinucleotide repeat containing adaptor 6C2. | 0.864 |
LOC103139283 | LOC103141734 | ENSPFOP00000005999 | ENSPFOP00000012831 | Argonaute RISC component 1; Belongs to the argonaute family. | Trinucleotide repeat containing adaptor 6C1. | 0.864 |
LOC103139283 | dicer1 | ENSPFOP00000005999 | ENSPFOP00000008767 | Argonaute RISC component 1; Belongs to the argonaute family. | Dicer 1, ribonuclease type III; Belongs to the helicase family. Dicer subfamily. | 0.954 |
LOC103139283 | drosha | ENSPFOP00000005999 | ENSPFOP00000000631 | Argonaute RISC component 1; Belongs to the argonaute family. | Uncharacterized protein. | 0.876 |
LOC103139283 | mff | ENSPFOP00000005999 | ENSPFOP00000012833 | Argonaute RISC component 1; Belongs to the argonaute family. | Mitochondrial fission factor. | 0.840 |
LOC103139283 | mrpl44 | ENSPFOP00000005999 | ENSPFOP00000026552 | Argonaute RISC component 1; Belongs to the argonaute family. | Mitochondrial ribosomal protein L44. | 0.840 |
LOC103139283 | prkra | ENSPFOP00000005999 | ENSPFOP00000015057 | Argonaute RISC component 1; Belongs to the argonaute family. | Protein kinase, interferon-inducible double stranded RNA dependent activator. | 0.866 |
LOC103139283 | stau2 | ENSPFOP00000005999 | ENSPFOP00000013230 | Argonaute RISC component 1; Belongs to the argonaute family. | Staufen double-stranded RNA binding protein 2. | 0.825 |
LOC103139283 | tarbp2 | ENSPFOP00000005999 | ENSPFOP00000007494 | Argonaute RISC component 1; Belongs to the argonaute family. | RISC-loading complex subunit TARBP2; Required for formation of the RNA induced silencing complex (RISC). Component of the RISC loading complex (RLC), also known as the micro-RNA (miRNA) loading complex (miRLC), which is composed of DICER1, AGO2 and TARBP2. Within the RLC/miRLC, DICER1 and TARBP2 are required to process precursor miRNAs (pre-miRNAs) to mature miRNAs and then load them onto AGO2. AGO2 bound to the mature miRNA constitutes the minimal RISC and may subsequently dissociate from DICER1 and TARBP2. May also play a role in the production of short interfering RNAs (siRNAs) from [...] | 0.866 |
LOC103141734 | LOC103139283 | ENSPFOP00000012831 | ENSPFOP00000005999 | Trinucleotide repeat containing adaptor 6C1. | Argonaute RISC component 1; Belongs to the argonaute family. | 0.864 |
LOC103141734 | dicer1 | ENSPFOP00000012831 | ENSPFOP00000008767 | Trinucleotide repeat containing adaptor 6C1. | Dicer 1, ribonuclease type III; Belongs to the helicase family. Dicer subfamily. | 0.466 |
LOC103141734 | drosha | ENSPFOP00000012831 | ENSPFOP00000000631 | Trinucleotide repeat containing adaptor 6C1. | Uncharacterized protein. | 0.429 |
dicer1 | ENSPFOP00000009029 | ENSPFOP00000008767 | ENSPFOP00000009029 | Dicer 1, ribonuclease type III; Belongs to the helicase family. Dicer subfamily. | Trinucleotide repeat containing adaptor 6A. | 0.466 |
page 1 of 4