STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103138929Uncharacterized protein. (1166 aa)    
Predicted Functional Partners:
ENSPFOP00000005575
Contactin 2.
   
0.807
ENSPFOP00000000103
Uncharacterized protein.
    
0.739
ENSPFOP00000000245
Contactin 4.
    
0.739
cntn5
Contactin 5.
    
0.739
CNTN1
Contactin 1.
    
0.739
ENSPFOP00000005936
Contactin 3a, tandem duplicate 2.
    
0.739
LOC103138930
Contactin 3a, tandem duplicate 1.
    
0.739
LOC103156705
Contactin 1b.
    
0.739
ENSPFOP00000015429
Contactin 1b.
    
0.739
ENSPFOP00000024206
Contactin 3b.
    
0.739
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.