STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103143490Uncharacterized protein; Belongs to the intermediate filament family. (642 aa)    
Predicted Functional Partners:
ENSPFOP00000011297
Caspase 6, apoptosis-related cysteine peptidase a; Belongs to the peptidase C14A family.
   
 0.950
ENSPFOP00000003293
Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family.
    
 0.934
LOC103150443
Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family.
    
 0.926
LOC103150441
Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family.
    
 0.908
LOC103150641
Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family.
    
 0.899
ENSPFOP00000008646
Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family.
    
 0.899
ENSPFOP00000027633
Lamin B1; Belongs to the intermediate filament family.
     
0.889
lmnb2
Lamin B2; Belongs to the intermediate filament family.
     
0.888
LOC103131328
Uncharacterized protein.
   
 0.817
LOC103133895
Barrier to autointegration factor 1.
   
 0.817
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.