STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dhx35DEAH-box helicase 35. (692 aa)    
Predicted Functional Partners:
slu7
SLU7 homolog, splicing factor.
   
 0.951
cwc22
CWC22 spliceosome associated protein homolog.
   
 0.946
ENSPFOP00000004074
SYF2 pre-mRNA-splicing factor.
    
 0.945
ddx49
DEAD (Asp-Glu-Ala-Asp) box polypeptide 49; Belongs to the DEAD box helicase family.
  
 0.943
UTP14C
UTP14C small subunit processome component.
   
 0.942
utp3
UTP3 small subunit processome component.
   
 0.941
imp3
IMP U3 small nucleolar ribonucleoprotein 3.
   
 0.939
utp25
UTP25 small subunit processor component.
   
 0.935
yju2
YJU2 splicing factor homolog.
    
 0.932
prpf18
PRP18 pre-mRNA processing factor 18 homolog (yeast).
   
 0.932
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.