STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPFOP00000007878Pygopus homolog 2 (Drosophila). (381 aa)    
Predicted Functional Partners:
ENSPFOP00000015063
Actin-like 6A; Belongs to the actin family.
    
 0.865
mysm1
Myb-like, SWIRM and MPN domains 1.
   
 0.863
ENSPFOP00000014025
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1; Belongs to the SNF5 family.
   
 0.820
LOC103131305
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1; Belongs to the SNF5 family.
   
 0.820
phf10
PHD finger protein 10.
    
 0.815
arid2
AT rich interactive domain 2 (ARID, RFX-like).
    
 0.812
ENSPFOP00000001798
Polybromo 1.
    
 0.801
LOC103137456
Polybromo 1, like.
    
 0.801
ctnnb1
Catenin (cadherin-associated protein), beta 1.
   
 0.787
ENSPFOP00000012523
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3b.
   
 0.786
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.