STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103155563Occludin a. (511 aa)    
Predicted Functional Partners:
LOC103139421
Tight junction protein 1a; Belongs to the MAGUK family.
   
 0.986
ENSPFOP00000005566
Tight junction protein 1b; Belongs to the MAGUK family.
   
 0.986
LOC103155158
Tight junction protein 3; Belongs to the MAGUK family.
   
 0.932
ENSPFOP00000018276
Tight junction protein 2a (zona occludens 2); Belongs to the MAGUK family.
   
 0.928
LOC103156665
Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family.
   
 0.926
ENSPFOP00000005698
Occludin b.
  
 
 
0.925
LOC103152501
Tyrosine-protein kinase.
    
 0.923
SRC
Tyrosine-protein kinase.
    
 0.923
LOC103129117
Par-3 family cell polarity regulator alpha, b.
    
 0.911
PARD3
Uncharacterized protein.
    
 0.911
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.