STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103144842Transmembrane protein 184C. (447 aa)    
Predicted Functional Partners:
dpy30
Dpy-30 histone methyltransferase complex regulatory subunit.
    
   0.578
gabarapl2
GABA(A) receptor-associated protein like 2.
    
   0.563
map1lc3b
Microtubule-associated protein 1 light chain 3 beta.
    
   0.563
map1lc3c
Microtubule-associated protein 1 light chain 3 gamma.
    
   0.563
LOC103136899
Microtubule-associated protein 1 light chain 3 gamma, like.
    
   0.563
ENSPFOP00000012440
Zgc:92606.
    
   0.563
map1lc3a
Microtubule-associated protein 1 light chain 3 alpha.
    
   0.563
GABARAPL2
GABA type A receptor associated protein like 2.
    
   0.563
ENSPFOP00000004987
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
   0.558
ube2i
Ubiquitin-conjugating enzyme E2Ib; Belongs to the ubiquitin-conjugating enzyme family.
    
   0.558
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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