STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPFOP00000009845Rhophilin associated tail protein 1-like. (210 aa)    
Predicted Functional Partners:
LOC103135793
Protein kinase, cAMP-dependent, catalytic, beta b; Belongs to the protein kinase superfamily.
    
 
 0.663
LOC103130823
Uncharacterized protein; Belongs to the protein kinase superfamily.
    
 
 0.663
ENSPFOP00000002298
Protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate a; Belongs to the protein kinase superfamily.
    
 
 0.618
prkaca
Protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate b; Belongs to the protein kinase superfamily.
    
 
 0.618
cmbl
Carboxymethylenebutenolidase homolog (Pseudomonas).
      
 0.605
MARCHF6
Membrane associated ring-CH-type finger 6.
      
 0.604
ENSPFOP00000014254
RING-CH-type domain-containing protein.
      
 0.604
ENSPFOP00000013001
Dynein, axonemal, light intermediate chain 1.
      
 0.554
LOC103136472
Coiled-coil domain containing 114.
   
  
 0.510
ENSPFOP00000015023
Ciliogenesis associated TTC17 interacting protein.
   
  
 0.485
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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