STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ribc1RIB43A domain with coiled-coils 1. (374 aa)    
Predicted Functional Partners:
ENSPFOP00000019506
EF-hand domain (C-terminal) containing 1.
  
 
 0.841
tekt3
Tektin 3.
   
 
 0.839
mns1
Meiosis-specific nuclear structural 1.
  
 
 0.835
ENSPFOP00000008684
EF-hand domain (C-terminal) containing 2.
  
 
 0.821
ENSPFOP00000011350
PARK2 co-regulated.
  
 
 0.813
ENSPFOP00000000899
Calcium/calmodulin-dependent serine protein kinase b; Belongs to the MAGUK family.
    
 0.806
cask
Uncharacterized protein; Belongs to the MAGUK family.
    
 0.806
cfap45
Cilia and flagella associated protein 45.
   
 0.798
ENSPFOP00000004125
Uncharacterized protein.
   
   0.785
ENSPFOP00000009431
Coiled-coil domain containing 173.
    
  0.767
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.