STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPFOP00000011596Spectrin beta chain; Belongs to the spectrin family. (2376 aa)    
Predicted Functional Partners:
ENSPFOP00000008150
Spectrin alpha, non-erythrocytic 1.
   
0.935
ENSPFOP00000007143
Ankyrin 1, erythrocytic b.
   
 0.713
LOC103151885
Ankyrin 1, erythrocytic a.
   
 0.713
ENSPFOP00000017091
Uncharacterized protein.
   
 0.710
ENSPFOP00000017093
Uncharacterized protein.
   
 0.710
ENSPFOP00000017482
Uncharacterized protein.
   
 0.710
ENSPFOP00000018387
Ankyrin 3a.
   
 0.710
ENSPFOP00000027172
ANK_REP_REGION domain-containing protein.
   
 0.710
ankdd1b
Ankyrin repeat and death domain containing 1B.
   
 0.705
LOC103141352
Poly [ADP-ribose] polymerase.
   
 0.663
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.