STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LGR5Leucine rich repeat containing G protein-coupled receptor 5. (927 aa)    
Predicted Functional Partners:
LOC103136649
R-spondin 3.
  
 0.954
rspo2
R-spondin 2.
  
 0.946
ENSPFOP00000025096
R-spondin 4.
  
 0.940
ENSPFOP00000028219
Uncharacterized protein.
   
 0.918
LGR6
Leucine rich repeat containing G protein-coupled receptor 6.
  
0.912
ENSPFOP00000001367
Leucine-rich repeat containing G protein-coupled receptor 4.
  
0.906
LOC103139316
Leucine-rich repeat-containing G-protein coupled receptor 4.
  
0.906
ENSPFOP00000014566
Zinc and ring finger 3.
    
 0.902
LOC103141530
R-spondin 1.
  
 0.893
RNF43
Ring finger protein 43.
    
 0.890
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.