Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ENSPFOP00000000686 | LOC103155772 | ENSPFOP00000000686 | ENSPFOP00000000740 | Adenylate kinase 9. | NME/NM23 family member 8; Belongs to the NDK family. | 0.961 |
ENSPFOP00000000686 | znf385c | ENSPFOP00000000686 | ENSPFOP00000011743 | Adenylate kinase 9. | Zinc finger protein 385C. | 0.589 |
ENSPFOP00000005078 | ENSPFOP00000028219 | ENSPFOP00000005078 | ENSPFOP00000028219 | BRCA1 associated RING domain 1. | Uncharacterized protein. | 0.424 |
ENSPFOP00000005078 | LOC103155772 | ENSPFOP00000005078 | ENSPFOP00000000740 | BRCA1 associated RING domain 1. | NME/NM23 family member 8; Belongs to the NDK family. | 0.418 |
ENSPFOP00000005078 | YTHDC2 | ENSPFOP00000005078 | ENSPFOP00000004214 | BRCA1 associated RING domain 1. | YTH domain containing 2. | 0.684 |
ENSPFOP00000005078 | tp53 | ENSPFOP00000005078 | ENSPFOP00000007556 | BRCA1 associated RING domain 1. | Cellular tumor antigen p53; Acts as a tumor suppressor in many tumor types; induces growth arrest or apoptosis depending on the physiological circumstances and cell type. Involved in cell cycle regulation as a trans-activator that acts to negatively regulate cell division by controlling a set of genes required for this process. One of the activated genes is an inhibitor of cyclin-dependent kinases. Apoptosis induction seems to be mediated either by stimulation of BAX and FAS antigen expression, or by repression of Bcl-2 expression; Belongs to the p53 family. | 0.924 |
ENSPFOP00000005078 | znf385c | ENSPFOP00000005078 | ENSPFOP00000011743 | BRCA1 associated RING domain 1. | Zinc finger protein 385C. | 0.589 |
ENSPFOP00000028219 | ENSPFOP00000005078 | ENSPFOP00000028219 | ENSPFOP00000005078 | Uncharacterized protein. | BRCA1 associated RING domain 1. | 0.424 |
ENSPFOP00000028219 | znf385c | ENSPFOP00000028219 | ENSPFOP00000011743 | Uncharacterized protein. | Zinc finger protein 385C. | 0.588 |
ENSPFOP00000030063 | LOC103155772 | ENSPFOP00000030063 | ENSPFOP00000000740 | Mitochondrial ribosomal protein S15; Belongs to the universal ribosomal protein uS15 family. | NME/NM23 family member 8; Belongs to the NDK family. | 0.963 |
ENSPFOP00000030063 | YTHDC2 | ENSPFOP00000030063 | ENSPFOP00000004214 | Mitochondrial ribosomal protein S15; Belongs to the universal ribosomal protein uS15 family. | YTH domain containing 2. | 0.469 |
ENSPFOP00000030063 | znf385c | ENSPFOP00000030063 | ENSPFOP00000011743 | Mitochondrial ribosomal protein S15; Belongs to the universal ribosomal protein uS15 family. | Zinc finger protein 385C. | 0.469 |
LOC103131426 | LOC103155772 | ENSPFOP00000023773 | ENSPFOP00000000740 | Cytochrome b5 reductase 4. | NME/NM23 family member 8; Belongs to the NDK family. | 0.849 |
LOC103131426 | znf385c | ENSPFOP00000023773 | ENSPFOP00000011743 | Cytochrome b5 reductase 4. | Zinc finger protein 385C. | 0.507 |
LOC103155772 | ENSPFOP00000000686 | ENSPFOP00000000740 | ENSPFOP00000000686 | NME/NM23 family member 8; Belongs to the NDK family. | Adenylate kinase 9. | 0.961 |
LOC103155772 | ENSPFOP00000005078 | ENSPFOP00000000740 | ENSPFOP00000005078 | NME/NM23 family member 8; Belongs to the NDK family. | BRCA1 associated RING domain 1. | 0.418 |
LOC103155772 | ENSPFOP00000030063 | ENSPFOP00000000740 | ENSPFOP00000030063 | NME/NM23 family member 8; Belongs to the NDK family. | Mitochondrial ribosomal protein S15; Belongs to the universal ribosomal protein uS15 family. | 0.963 |
LOC103155772 | LOC103131426 | ENSPFOP00000000740 | ENSPFOP00000023773 | NME/NM23 family member 8; Belongs to the NDK family. | Cytochrome b5 reductase 4. | 0.849 |
LOC103155772 | znf385c | ENSPFOP00000000740 | ENSPFOP00000011743 | NME/NM23 family member 8; Belongs to the NDK family. | Zinc finger protein 385C. | 0.509 |
YTHDC2 | ENSPFOP00000005078 | ENSPFOP00000004214 | ENSPFOP00000005078 | YTH domain containing 2. | BRCA1 associated RING domain 1. | 0.684 |
page 1 of 2