STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ccdc77Coiled-coil domain containing 77. (491 aa)    
Predicted Functional Partners:
LOC103139126
Nuclear envelope integral membrane protein 1.
   
  
 0.603
ccdc34
Zgc:153293.
   
  
 0.575
slc13a5
Solute carrier family 13 member 5a.
    
 0.573
ENSPFOP00000003631
Solute carrier family 13 member 5b.
    
 0.573
ENSPFOP00000007810
Solute carrier family 13 member 3.
    
 0.573
ENSPFOP00000009284
Solute carrier family 13 member 2.
    
 0.573
slc13a4
Solute carrier family 13 member 4.
    
 0.573
ENSPFOP00000016818
Solute carrier family 13 member 1.
    
 0.573
LOC103153932
Uncharacterized protein.
      
 0.559
gstcd
Glutathione S-transferase, C-terminal domain containing.
      
 0.553
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.