STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103129430Contactin associated protein-like 5a. (1370 aa)    
Predicted Functional Partners:
ENSPFOP00000005575
Contactin 2.
   
 0.713
ENSPFOP00000006179
Uncharacterized protein.
   
 0.682
ENSPFOP00000000103
Uncharacterized protein.
   
 0.651
ENSPFOP00000000245
Contactin 4.
   
 0.651
cntn5
Contactin 5.
   
 0.651
CNTN1
Contactin 1.
   
 0.651
ENSPFOP00000005936
Contactin 3a, tandem duplicate 2.
   
 0.651
LOC103138930
Contactin 3a, tandem duplicate 1.
   
 0.651
LOC103156705
Contactin 1b.
   
 0.651
ENSPFOP00000015429
Contactin 1b.
   
 0.651
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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