STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103129275Matrix metallopeptidase 15a. (683 aa)    
Predicted Functional Partners:
TIMP3
TIMP metallopeptidase inhibitor 3.
    
 0.748
ENSPFOP00000012340
TIMP metallopeptidase inhibitor 2a.
    
 0.748
ENSPFOP00000022296
TIMP metallopeptidase inhibitor 2b.
    
 0.748
LOC103139106
Ubiquitin-conjugating enzyme E2 variant 1.
   
 
  0.698
timp4
TIMP metallopeptidase inhibitor 4, tandem duplicate 2.
    
 0.615
LOC103135326
CCAAT/enhancer binding protein (C/EBP) 1.
      
 0.608
ENSPFOP00000007936
Plasminogen activator, urokinase a; Belongs to the peptidase S1 family.
   
 0.593
LOC103150898
Uncharacterized protein.
   
 0.593
LOC103156589
Cyclin I; Belongs to the cyclin family.
      
 0.562
ENSPFOP00000004813
Matrix metallopeptidase 20b (enamelysin).
  
 
0.558
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.