STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPFOP00000013426Histone H2B; Belongs to the histone H2B family. (122 aa)    
Predicted Functional Partners:
leo1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.914
LOC103129818
H2A histone family, member Y; Belongs to the histone H2A family.
   
 0.879
ENSPFOP00000015483
Histone H2A; Belongs to the histone H2A family.
 
 0.855
ENSPFOP00000020889
Histone H2A; Belongs to the histone H2A family.
 
 0.855
LOC103140171
Histone H2A.
 
 0.854
ENSPFOP00000015461
Histone H2A; Belongs to the histone H2A family.
 
 0.853
LOC103154044
Histone H2A; Belongs to the histone H2A family.
 
 0.853
LOC103144615
Histone H2A; Belongs to the histone H2A family.
 
 0.853
LOC103144615-2
Histone H2A-like.
 
 0.853
LOC103130468
Histone H2A; Belongs to the histone H2A family.
 
 0.852
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.