STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103140298U2 small nuclear RNA auxiliary factor 1. (230 aa)    
Predicted Functional Partners:
LOC103153053
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.
   
 0.992
ENSPFOP00000010826
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.
   
 0.992
LOC103147203
Uncharacterized protein.
  
  
 
0.948
srsf2
Serine and arginine rich splicing factor 2a.
   
 0.867
srsf5
Serine and arginine rich splicing factor 5a.
   
 0.857
LOC103148541
Serine and arginine rich splicing factor 1a.
   
 0.824
ENSPFOP00000009592
Uncharacterized protein.
   
 0.824
LOC103140933
Uncharacterized protein.
   
 0.824
LOC103149198
Serine and arginine rich splicing factor 9.
   
 0.816
rnps1
RNA binding protein S1, serine-rich domain.
   
 0.796
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.