STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPFOP00000013865Uncharacterized protein. (386 aa)    
Predicted Functional Partners:
ENSPFOP00000004704
Structural maintenance of chromosomes protein.
   
 0.978
pds5a
PDS5 cohesin associated factor A.
   
 0.924
pds5b
PDS5 cohesin associated factor B.
   
 0.924
smc4
Structural maintenance of chromosomes protein.
   
 0.918
smc2
Structural maintenance of chromosomes protein.
   
 0.916
smc5
Structural maintenance of chromosomes 5.
   
 0.904
smc1a
Structural maintenance of chromosomes protein.
   
 0.903
LOC103147589
Structural maintenance of chromosomes protein.
   
 0.903
pcna
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.901
LOC103138573
Si:dkey-119f1.1.
   
 0.870
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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