ENSPFOP00000014490 protein (Poecilia formosa)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSPFOP00000014490

annotation not available (84 aa)

Predicted Functional Partners:

fau

0.999

rps26

0.992

rps15

0.992

rps21

0.992

rps13

0.992

rps16

0.992

rps18

0.991

RPS20

0.991

rps25

0.991

ENSPFOP00000002502

0.990

Your Current Organism:

Poecilia formosa

NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPFOP00000002502	ENSPFOP00000014490	ENSPFOP00000002502	ENSPFOP00000014490	Ribosomal protein S28.	annotation not available	0.990
ENSPFOP00000002502	RPS20	ENSPFOP00000002502	ENSPFOP00000012053	Ribosomal protein S28.	Ribosomal protein S20.	0.999
ENSPFOP00000002502	fau	ENSPFOP00000002502	ENSPFOP00000003766	Ribosomal protein S28.	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	0.999
ENSPFOP00000002502	rps13	ENSPFOP00000002502	ENSPFOP00000017450	Ribosomal protein S28.	Ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family.	0.999
ENSPFOP00000002502	rps15	ENSPFOP00000002502	ENSPFOP00000002977	Ribosomal protein S28.	Ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.	0.999
ENSPFOP00000002502	rps16	ENSPFOP00000002502	ENSPFOP00000017588	Ribosomal protein S28.	Ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family.	0.999
ENSPFOP00000002502	rps18	ENSPFOP00000002502	ENSPFOP00000005243	Ribosomal protein S28.	Ribosomal protein S18; Belongs to the universal ribosomal protein uS13 family.	0.999
ENSPFOP00000002502	rps21	ENSPFOP00000002502	ENSPFOP00000012922	Ribosomal protein S28.	40S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family.	0.999
ENSPFOP00000002502	rps25	ENSPFOP00000002502	ENSPFOP00000016567	Ribosomal protein S28.	40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.	0.999
ENSPFOP00000002502	rps26	ENSPFOP00000002502	ENSPFOP00000001551	Ribosomal protein S28.	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.	0.999
ENSPFOP00000014490	ENSPFOP00000002502	ENSPFOP00000014490	ENSPFOP00000002502	annotation not available	Ribosomal protein S28.	0.990
ENSPFOP00000014490	RPS20	ENSPFOP00000014490	ENSPFOP00000012053	annotation not available	Ribosomal protein S20.	0.991
ENSPFOP00000014490	fau	ENSPFOP00000014490	ENSPFOP00000003766	annotation not available	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	0.999
ENSPFOP00000014490	rps13	ENSPFOP00000014490	ENSPFOP00000017450	annotation not available	Ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family.	0.992
ENSPFOP00000014490	rps15	ENSPFOP00000014490	ENSPFOP00000002977	annotation not available	Ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.	0.992
ENSPFOP00000014490	rps16	ENSPFOP00000014490	ENSPFOP00000017588	annotation not available	Ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family.	0.992
ENSPFOP00000014490	rps18	ENSPFOP00000014490	ENSPFOP00000005243	annotation not available	Ribosomal protein S18; Belongs to the universal ribosomal protein uS13 family.	0.991
ENSPFOP00000014490	rps21	ENSPFOP00000014490	ENSPFOP00000012922	annotation not available	40S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family.	0.992
ENSPFOP00000014490	rps25	ENSPFOP00000014490	ENSPFOP00000016567	annotation not available	40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.	0.991
ENSPFOP00000014490	rps26	ENSPFOP00000014490	ENSPFOP00000001551	annotation not available	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.	0.992