STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ppp1r21Protein phosphatase 1, regulatory subunit 21. (785 aa)    
Predicted Functional Partners:
ENSPFOP00000022439
Radial spoke head 3.
    
   0.949
ENSPFOP00000003948
Crystallin, zeta (quinone reductase)-like 1.
    
   0.900
gatd1
Glutamine amidotransferase like class 1 domain containing 1.
    
   0.866
dtna
Dystrobrevin.
    
   0.823
LOC103153565
Dystrobrevin.
    
   0.823
ENSPFOP00000028945
Dystrobrevin.
    
   0.823
ENSPFOP00000030953
Dystrobrevin, beta b.
    
   0.823
LOC103155808
Zgc:154077.
    
 
 0.742
LOC103145284
Aquaporin 3 (Gill blood group); Belongs to the MIP/aquaporin (TC 1.A.8) family.
    
   0.736
aqp9
Aquaporin 9b; Belongs to the MIP/aquaporin (TC 1.A.8) family.
    
   0.736
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.