STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPFOP00000015461Histone H2A; Belongs to the histone H2A family. (152 aa)    
Predicted Functional Partners:
mysm1
Myb-like, SWIRM and MPN domains 1.
    
 0.998
LOC103154421
Histone H2A; Belongs to the histone H2A family.
  
0.936
ENSPFOP00000013426
Histone H2B; Belongs to the histone H2B family.
 
 0.853
LOC103147098
Lysine (K)-specific demethylase 6A, like.
    
 0.852
LOC103146601
Lysine (K)-specific demethylase 6B, a.
    
 0.852
kdm6a
Lysine (K)-specific demethylase 6A.
    
 0.852
LOC103133914
Lysine (K)-specific demethylase 6B, b.
    
 0.852
LOC103144613
Histone H2B; Belongs to the histone H2B family.
 
 0.851
LOC103144613-2
Histone H2B 1/2.
 
 0.851
LOC103144613-3
Histone H2B 1/2.
 
 0.851
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.