STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
wipf1WH2 domain-containing protein. (519 aa)    
Predicted Functional Partners:
was
WASP actin nucleation promoting factor a.
   
 0.911
grb2
Growth factor receptor-bound protein 2b.
    
 0.911
ENSPFOP00000016312
WASP like actin nucleation promoting factor b.
   
 0.911
ENSPFOP00000016947
WASP like actin nucleation promoting factor a.
   
 0.911
nck1
Cytoplasmic protein.
    
 0.858
nck2
Cytoplasmic protein.
    
 0.858
LOC103145954
Uncharacterized protein.
   
 0.854
LOC103143267
WH1 domain-containing protein.
   
 0.854
LOC103144092
Cell division cycle 42.
   
 0.766
CDC42
Cell division cycle 42.
   
 0.766
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.