STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPFOP00000015908Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family. (551 aa)    
Predicted Functional Partners:
sec24c
SEC24 homolog C, COPII coat complex component.
   
    0.743
ENSPFOP00000027452
Uncharacterized protein.
   
    0.666
plagl2
Pleiomorphic adenoma gene-like 2.
   
 
 0.619
tmed10
Transmembrane p24 trafficking protein 10.
   
  
 0.615
LOC103150212
Retinoblastoma binding protein 8-like.
      
 0.608
hck
Tyrosine-protein kinase.
    
 
 0.585
eef1aknmt
Methyltransferase like 13.
      
 0.552
ccdc115
Coiled-coil domain containing 115.
    
   0.531
plpp5
Phospholipid phosphatase 5.
    
   0.531
ENSPFOP00000017117
Phospholipid phosphatase 4.
    
   0.531
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.