STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPFOP00000016083Pleckstrin homology domain containing, family G (with RhoGef domain) member 7. (420 aa)    
Predicted Functional Partners:
ENSPFOP00000027647
Uncharacterized protein.
 
      0.880
tradd
Tnfrsf1a-associated via death domain.
    
 0.839
ENSPFOP00000012411
Tumor necrosis factor a (TNF superfamily, member 2); Belongs to the tumor necrosis factor family.
    
 0.828
LOC103154654
Tumor necrosis factor b (TNF superfamily, member 2).
    
 0.755
ENSPFOP00000010740
WD repeat and FYVE domain containing 3.
    
 0.717
LOC103133531
Uncharacterized protein.
    
 0.700
ENSPFOP00000004198
Baculoviral IAP repeat containing 6.
    
 0.682
bag3
BCL2 associated athanogene 3.
    
 0.660
optn
Optineurin.
    
 0.654
ikbkg
Inhibitor of nuclear factor kappa B kinase regulatory subunit gamma.
    
 0.654
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.