STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPFOP00000016285Lysyl oxidase-like 1. (551 aa)    
Predicted Functional Partners:
ENSPFOP00000015675
Uncharacterized protein.
    
 0.749
fbln5
Fibulin 5.
   
 
 0.692
ankrd1
Ankyrin repeat domain 1a (cardiac muscle).
   
 0.679
ENSPFOP00000028219
Uncharacterized protein.
   
  0.673
ENSPFOP00000003361
Receptor-interacting serine-threonine kinase 3; Belongs to the protein kinase superfamily.
   
 0.649
LOC103150641
Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family.
    
 0.623
ENSPFOP00000008646
Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family.
    
 0.623
ripk4
Receptor-interacting serine-threonine kinase 4.
   
  0.616
PTK7
Protein tyrosine kinase 7 (inactive); Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
  0.615
arid4a
AT rich interactive domain 4A (RBP1-like).
    
 0.598
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.