STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103150130Eyes absent homolog; Belongs to the HAD-like hydrolase superfamily. EYA family. (475 aa)    
Predicted Functional Partners:
six1
SIX homeobox 1a.
   
 
 0.661
LOC103136296
SIX homeobox 5.
   
 
 0.660
LOC103136298
SIX homeobox 9.
   
 
 0.660
six2
SIX homeobox 2a.
   
 
 0.660
six4
SIX homeobox 4a.
   
 
 0.660
LOC103133047
SIX homeobox 7.
   
 
 0.628
six6
SIX homeobox 6a.
   
 
 0.628
LOC103133047-2
SIX homeobox 7.
   
 
 0.628
LOC103145134
SIX homeobox 3b.
   
 
 0.628
six3
SIX homeobox 3a.
   
 
 0.628
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.