STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tfip11Tuftelin-interacting protein 11; Involved in pre-mRNA splicing, specifically in spliceosome disassembly during late-stage splicing events. Belongs to the TFP11/STIP family. (831 aa)    
Predicted Functional Partners:
bud31
BUD31 homolog.
    
 
 0.990
crnkl1
Crooked neck pre-mRNA splicing factor 1.
   
   0.989
DHX15
DEAH-box helicase 15.
   
 0.984
ENSPFOP00000001088
DEAH (Asp-Glu-Ala-His) box helicase 15.
   
 0.980
eftud2
Elongation factor Tu GTP binding domain containing 2.
   
 
 0.973
prpf8
Pre-mRNA processing factor 8.
    
 
 0.969
ENSPFOP00000009459
Small nuclear ribonucleoprotein polypeptide A.
    
 
 0.962
xab2
XPA binding protein 2.
   
 
 0.955
ENSPFOP00000000320
Cell division cycle 40 homolog (S. cerevisiae).
   
 0.949
ENSPFOP00000004074
SYF2 pre-mRNA-splicing factor.
    
  0.949
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.