STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPL5Ribosomal protein L5b. (297 aa)    
Predicted Functional Partners:
fau
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.999
ENSPFOP00000010679
Eukaryotic translation elongation factor 1 gamma.
   
 0.999
ENSPFOP00000000526
Ribosomal protein L36A; Belongs to the eukaryotic ribosomal protein eL42 family.
   
 0.997
LOC103144500
Ribosomal protein L26.
  
 0.997
ENSPFOP00000001295
Ribosomal protein L10.
  
 0.997
rpl17
Ribosomal protein L17; Belongs to the universal ribosomal protein uL22 family.
  
 0.997
ENSPFOP00000003616
Ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family.
  
 0.997
rpl31
Ribosomal protein L31.
   
 0.997
rpl35
Ribosomal protein L35.
  
 0.997
LOC103142392
Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family.
   
 0.997
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
Server load: medium (52%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.