STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPL5Ribosomal protein L5b. (297 aa)    
Predicted Functional Partners:
rpl21
Ribosomal protein L21.
   
 0.999
LOC103144500
Ribosomal protein L26.
  
 0.998
rpl28
Ribosomal protein L28.
   
 0.998
ENSPFOP00000003616
Ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family.
  
 0.998
rpl31
Ribosomal protein L31.
   
 0.998
rpl35
Ribosomal protein L35.
  
 0.998
LOC103142392
Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family.
   
 0.998
rpl18
Ribosomal protein L18.
  
 0.998
rpl4
Ribosomal protein L4.
  
 0.998
RPL27A
Ribosomal protein L27a; Belongs to the universal ribosomal protein uL15 family.
  
 0.998
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.