RBPMS protein (Poecilia formosa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

Coexpression

Experiments

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[Homology]

Score

RBPMS

RNA binding protein, mRNA processing factor. (194 aa)

Predicted Functional Partners:

LOC103144233

0.811

LOC103151187

0.811

rbpms2

0.703

ENSPFOP00000001887

0.673

LOC103137756

0.673

LOC103136652

0.656

khdrbs2

0.615

LOC103146669

0.615

ENSPFOP00000028421

0.615

ENSPFOP00000014512

0.525

Your Current Organism:

Poecilia formosa

NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPFOP00000001887	ENSPFOP00000028421	ENSPFOP00000001887	ENSPFOP00000028421	RNA binding protein fox-1 homolog 2; RNA-binding protein that regulates alternative splicing events.	KH domain containing, RNA binding, signal transduction associated 1a.	0.413
ENSPFOP00000001887	LOC103144233	ENSPFOP00000001887	ENSPFOP00000004607	RNA binding protein fox-1 homolog 2; RNA-binding protein that regulates alternative splicing events.	QKI, KH domain containing, RNA binding a.	0.644
ENSPFOP00000001887	LOC103146669	ENSPFOP00000001887	ENSPFOP00000012236	RNA binding protein fox-1 homolog 2; RNA-binding protein that regulates alternative splicing events.	KH domain containing, RNA binding, signal transduction associated 1b.	0.413
ENSPFOP00000001887	LOC103151187	ENSPFOP00000001887	ENSPFOP00000014121	RNA binding protein fox-1 homolog 2; RNA-binding protein that regulates alternative splicing events.	QKI, KH domain containing, RNA binding 2.	0.644
ENSPFOP00000001887	RBPMS	ENSPFOP00000001887	ENSPFOP00000017239	RNA binding protein fox-1 homolog 2; RNA-binding protein that regulates alternative splicing events.	RNA binding protein, mRNA processing factor.	0.673
ENSPFOP00000001887	khdrbs2	ENSPFOP00000001887	ENSPFOP00000011741	RNA binding protein fox-1 homolog 2; RNA-binding protein that regulates alternative splicing events.	KH domain containing, RNA binding, signal transduction associated 2.	0.413
ENSPFOP00000001887	rbpms2	ENSPFOP00000001887	ENSPFOP00000016139	RNA binding protein fox-1 homolog 2; RNA-binding protein that regulates alternative splicing events.	RNA binding protein, mRNA processing factor 2b.	0.643
ENSPFOP00000014512	LOC103144233	ENSPFOP00000014512	ENSPFOP00000004607	Epithelial splicing regulatory protein 2.	QKI, KH domain containing, RNA binding a.	0.430
ENSPFOP00000014512	LOC103151187	ENSPFOP00000014512	ENSPFOP00000014121	Epithelial splicing regulatory protein 2.	QKI, KH domain containing, RNA binding 2.	0.430
ENSPFOP00000014512	RBPMS	ENSPFOP00000014512	ENSPFOP00000017239	Epithelial splicing regulatory protein 2.	RNA binding protein, mRNA processing factor.	0.525
ENSPFOP00000028421	ENSPFOP00000001887	ENSPFOP00000028421	ENSPFOP00000001887	KH domain containing, RNA binding, signal transduction associated 1a.	RNA binding protein fox-1 homolog 2; RNA-binding protein that regulates alternative splicing events.	0.413
ENSPFOP00000028421	LOC103136652	ENSPFOP00000028421	ENSPFOP00000009377	KH domain containing, RNA binding, signal transduction associated 1a.	RNA binding protein fox-1 homolog; RNA-binding protein that regulates alternative splicing events.	0.413
ENSPFOP00000028421	LOC103137756	ENSPFOP00000028421	ENSPFOP00000014297	KH domain containing, RNA binding, signal transduction associated 1a.	RNA binding fox-1 homolog 2.	0.413
ENSPFOP00000028421	RBPMS	ENSPFOP00000028421	ENSPFOP00000017239	KH domain containing, RNA binding, signal transduction associated 1a.	RNA binding protein, mRNA processing factor.	0.615
LOC103136652	ENSPFOP00000028421	ENSPFOP00000009377	ENSPFOP00000028421	RNA binding protein fox-1 homolog; RNA-binding protein that regulates alternative splicing events.	KH domain containing, RNA binding, signal transduction associated 1a.	0.413
LOC103136652	LOC103144233	ENSPFOP00000009377	ENSPFOP00000004607	RNA binding protein fox-1 homolog; RNA-binding protein that regulates alternative splicing events.	QKI, KH domain containing, RNA binding a.	0.644
LOC103136652	LOC103146669	ENSPFOP00000009377	ENSPFOP00000012236	RNA binding protein fox-1 homolog; RNA-binding protein that regulates alternative splicing events.	KH domain containing, RNA binding, signal transduction associated 1b.	0.413
LOC103136652	LOC103151187	ENSPFOP00000009377	ENSPFOP00000014121	RNA binding protein fox-1 homolog; RNA-binding protein that regulates alternative splicing events.	QKI, KH domain containing, RNA binding 2.	0.644
LOC103136652	RBPMS	ENSPFOP00000009377	ENSPFOP00000017239	RNA binding protein fox-1 homolog; RNA-binding protein that regulates alternative splicing events.	RNA binding protein, mRNA processing factor.	0.656
LOC103136652	khdrbs2	ENSPFOP00000009377	ENSPFOP00000011741	RNA binding protein fox-1 homolog; RNA-binding protein that regulates alternative splicing events.	KH domain containing, RNA binding, signal transduction associated 2.	0.413