STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103142956Homer scaffold protein 1b. (358 aa)    
Predicted Functional Partners:
LOC103131440
WH1 domain-containing protein.
  
 
0.976
ENSPFOP00000015195
Glutamate receptor, metabotropic 1b.
    
 0.975
LOC103134970
Glutamate receptor, metabotropic 1a.
    
 0.975
homer3
Homer scaffold protein 3b.
  
 
0.930
ENSPFOP00000017493
Homer scaffold protein 2.
  
 
 
0.851
HOMER2
Homer scaffold protein 2.
  
 
 
0.850
ENSPFOP00000007202
Glutamate receptor, metabotropic 5b.
    
 0.813
LOC103140495
Glutamate receptor, metabotropic 5a.
    
 0.813
ENSPFOP00000004545
Uncharacterized protein.
    
 0.747
ENSPFOP00000012259
Uncharacterized protein.
    
 0.747
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.