Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ENSPFOP00000001884 | ENSPFOP00000006424 | ENSPFOP00000001884 | ENSPFOP00000006424 | Pumilio RNA-binding family member 3. | EBNA1 binding protein 2. | 0.998 |
ENSPFOP00000001884 | ENSPFOP00000015249 | ENSPFOP00000001884 | ENSPFOP00000015249 | Pumilio RNA-binding family member 3. | BMS1 ribosome biogenesis factor. | 0.914 |
ENSPFOP00000001884 | ENSPFOP00000019162 | ENSPFOP00000001884 | ENSPFOP00000019162 | Pumilio RNA-binding family member 3. | NOC2-like nucleolar associated transcriptional repressor. | 0.979 |
ENSPFOP00000001884 | cebpz | ENSPFOP00000001884 | ENSPFOP00000003990 | Pumilio RNA-binding family member 3. | CCAAT enhancer binding protein zeta. | 0.983 |
ENSPFOP00000001884 | ddx27 | ENSPFOP00000001884 | ENSPFOP00000012254 | Pumilio RNA-binding family member 3. | DEAD (Asp-Glu-Ala-Asp) box polypeptide 27; Belongs to the DEAD box helicase family. | 0.960 |
ENSPFOP00000001884 | gtpbp4 | ENSPFOP00000001884 | ENSPFOP00000000024 | Pumilio RNA-binding family member 3. | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | 0.997 |
ENSPFOP00000001884 | nifk | ENSPFOP00000001884 | ENSPFOP00000000476 | Pumilio RNA-binding family member 3. | Nucleolar protein interacting with the FHA domain of MKI67. | 0.992 |
ENSPFOP00000001884 | rbm28 | ENSPFOP00000001884 | ENSPFOP00000018328 | Pumilio RNA-binding family member 3. | RNA binding motif protein 28. | 0.986 |
ENSPFOP00000001884 | rbm34 | ENSPFOP00000001884 | ENSPFOP00000009888 | Pumilio RNA-binding family member 3. | Uncharacterized protein. | 0.890 |
ENSPFOP00000001884 | rrp12 | ENSPFOP00000001884 | ENSPFOP00000015392 | Pumilio RNA-binding family member 3. | Ribosomal RNA processing 12 homolog. | 0.885 |
ENSPFOP00000006424 | ENSPFOP00000001884 | ENSPFOP00000006424 | ENSPFOP00000001884 | EBNA1 binding protein 2. | Pumilio RNA-binding family member 3. | 0.998 |
ENSPFOP00000006424 | ENSPFOP00000015249 | ENSPFOP00000006424 | ENSPFOP00000015249 | EBNA1 binding protein 2. | BMS1 ribosome biogenesis factor. | 0.912 |
ENSPFOP00000006424 | ENSPFOP00000019162 | ENSPFOP00000006424 | ENSPFOP00000019162 | EBNA1 binding protein 2. | NOC2-like nucleolar associated transcriptional repressor. | 0.998 |
ENSPFOP00000006424 | cebpz | ENSPFOP00000006424 | ENSPFOP00000003990 | EBNA1 binding protein 2. | CCAAT enhancer binding protein zeta. | 0.976 |
ENSPFOP00000006424 | ddx27 | ENSPFOP00000006424 | ENSPFOP00000012254 | EBNA1 binding protein 2. | DEAD (Asp-Glu-Ala-Asp) box polypeptide 27; Belongs to the DEAD box helicase family. | 0.972 |
ENSPFOP00000006424 | gtpbp4 | ENSPFOP00000006424 | ENSPFOP00000000024 | EBNA1 binding protein 2. | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | 0.996 |
ENSPFOP00000006424 | nifk | ENSPFOP00000006424 | ENSPFOP00000000476 | EBNA1 binding protein 2. | Nucleolar protein interacting with the FHA domain of MKI67. | 0.999 |
ENSPFOP00000006424 | rbm28 | ENSPFOP00000006424 | ENSPFOP00000018328 | EBNA1 binding protein 2. | RNA binding motif protein 28. | 0.986 |
ENSPFOP00000006424 | rbm34 | ENSPFOP00000006424 | ENSPFOP00000009888 | EBNA1 binding protein 2. | Uncharacterized protein. | 0.972 |
ENSPFOP00000006424 | rrp12 | ENSPFOP00000006424 | ENSPFOP00000015392 | EBNA1 binding protein 2. | Ribosomal RNA processing 12 homolog. | 0.842 |
page 1 of 6