Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ENSPFOP00000001219 | ENSPFOP00000018581 | ENSPFOP00000001219 | ENSPFOP00000018581 | Hydroxysteroid dehydrogenase like 2. | Uncharacterized protein. | 0.736 |
ENSPFOP00000001219 | ENSPFOP00000028053 | ENSPFOP00000001219 | ENSPFOP00000028053 | Hydroxysteroid dehydrogenase like 2. | AMP-binding domain-containing protein. | 0.815 |
ENSPFOP00000001219 | med14 | ENSPFOP00000001219 | ENSPFOP00000014194 | Hydroxysteroid dehydrogenase like 2. | Mediator of RNA polymerase II transcription subunit 14; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.614 |
ENSPFOP00000001219 | ndufab1 | ENSPFOP00000001219 | ENSPFOP00000008822 | Hydroxysteroid dehydrogenase like 2. | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | 0.895 |
ENSPFOP00000001219 | palb2 | ENSPFOP00000001219 | ENSPFOP00000022812 | Hydroxysteroid dehydrogenase like 2. | PALB2_WD40 domain-containing protein. | 0.895 |
ENSPFOP00000018581 | ENSPFOP00000001219 | ENSPFOP00000018581 | ENSPFOP00000001219 | Uncharacterized protein. | Hydroxysteroid dehydrogenase like 2. | 0.736 |
ENSPFOP00000018581 | ENSPFOP00000028053 | ENSPFOP00000018581 | ENSPFOP00000028053 | Uncharacterized protein. | AMP-binding domain-containing protein. | 0.814 |
ENSPFOP00000018581 | MED15 | ENSPFOP00000018581 | ENSPFOP00000008430 | Uncharacterized protein. | Mediator of RNA polymerase II transcription subunit 15; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.695 |
ENSPFOP00000018581 | med1 | ENSPFOP00000018581 | ENSPFOP00000001635 | Uncharacterized protein. | Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.694 |
ENSPFOP00000018581 | med14 | ENSPFOP00000018581 | ENSPFOP00000014194 | Uncharacterized protein. | Mediator of RNA polymerase II transcription subunit 14; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.699 |
ENSPFOP00000018581 | med23 | ENSPFOP00000018581 | ENSPFOP00000010879 | Uncharacterized protein. | Mediator complex subunit 23. | 0.711 |
ENSPFOP00000018581 | ndufab1 | ENSPFOP00000018581 | ENSPFOP00000008822 | Uncharacterized protein. | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | 0.795 |
ENSPFOP00000018581 | nup93 | ENSPFOP00000018581 | ENSPFOP00000013150 | Uncharacterized protein. | Nuclear pore complex protein Nup93; Plays a role in the nuclear pore complex (NPC) assembly and/or maintenance; Belongs to the nucleoporin interacting component (NIC) family. | 0.773 |
ENSPFOP00000018581 | palb2 | ENSPFOP00000018581 | ENSPFOP00000022812 | Uncharacterized protein. | PALB2_WD40 domain-containing protein. | 0.795 |
ENSPFOP00000018581 | rpl9 | ENSPFOP00000018581 | ENSPFOP00000010363 | Uncharacterized protein. | Ribosomal protein L9. | 0.694 |
ENSPFOP00000028053 | ENSPFOP00000001219 | ENSPFOP00000028053 | ENSPFOP00000001219 | AMP-binding domain-containing protein. | Hydroxysteroid dehydrogenase like 2. | 0.815 |
ENSPFOP00000028053 | ENSPFOP00000018581 | ENSPFOP00000028053 | ENSPFOP00000018581 | AMP-binding domain-containing protein. | Uncharacterized protein. | 0.814 |
ENSPFOP00000028053 | ndufab1 | ENSPFOP00000028053 | ENSPFOP00000008822 | AMP-binding domain-containing protein. | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | 0.996 |
ENSPFOP00000028053 | palb2 | ENSPFOP00000028053 | ENSPFOP00000022812 | AMP-binding domain-containing protein. | PALB2_WD40 domain-containing protein. | 0.996 |
MED15 | ENSPFOP00000018581 | ENSPFOP00000008430 | ENSPFOP00000018581 | Mediator of RNA polymerase II transcription subunit 15; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Uncharacterized protein. | 0.695 |
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